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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=CluMSID
_pkgver=1.18.0
pkgname=r-${_pkgname,,}
pkgver=1.18.0
pkgrel=1
pkgdesc='Clustering of MS2 Spectra for Metabolite Identification'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-ape
r-biobase
r-dbscan
r-ggally
r-ggplot2
r-gplots
r-msnbase
r-mzr
r-network
r-plotly
r-rcolorbrewer
r-s4vectors
r-sna
)
optdepends=(
r-clumsiddata
r-dplyr
r-knitr
r-magrittr
r-metams
r-metamsdata
r-readr
r-rmarkdown
r-stringr
r-testthat
r-xcms
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('fee61fb688e5e4dad9a42d75a81d14e6b1ee0757107c13162aef71be191bc547')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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