blob: f8b92366b6fe8eba3af1947aa3c902eb1daf4183 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=coexnet
_pkgver=1.19.1
pkgname=r-${_pkgname,,}
pkgver=1.19.1
pkgrel=4
pkgdesc='coexnet: An R package to build CO-EXpression NETworks from Microarray Data'
arch=('any')
url="https://bioconductor.org/packages/3.16/${_pkgname}"
license=('LGPL')
depends=(
r
r-acde
r-affy
r-biobase
r-geoquery
r-igraph
r-limma
r-minet
r-rmarkdown
r-siggenes
r-stringdb
r-summarizedexperiment
r-vsn
)
optdepends=(
r-biocgenerics
r-knitr
r-runit
)
makedepends=(
git
)
source=("git+https://git.bioconductor.org/packages/${_pkgname}")
sha256sums=('SKIP')
build() {
tar -zcvf ${_pkgname}_${_pkgver}.tar.gz ${_pkgname}
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|