blob: 210438b07bbebed041b10c408fd144b3d726b008 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=copa
_pkgver=1.72.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Functions to perform cancer outlier profile analysis"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-biobase
)
optdepends=(
r-colonca
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('fb39db43120b4f25ce43c970daf9447d')
b2sums=('04dd4a5a85c016e03d15a70731cadb5730f03305f9b0b0c2dbcc58f511378eb428130aab293dccb8dfe224813b1b7702766d295a5f72c0cc010b608a7dab100d')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
|