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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=CRISPRseek
_pkgver=1.42.0
pkgname=r-${_pkgname,,}
pkgver=1.42.0
pkgrel=1
pkgdesc='Design of target-specific guide RNAs in CRISPR-Cas9, genome-editing systems'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocgenerics
r-biostrings
r-bsgenome
r-data.table
r-delayedarray
r-dplyr
r-genomeinfodb
r-genomicranges
r-hash
r-iranges
r-keras
r-mltools
r-reticulate
r-rhdf5
r-s4vectors
r-seqinr
r-xvector
)
optdepends=(
r-biocstyle
r-bsgenome.hsapiens.ucsc.hg19
r-bsgenome.mmusculus.ucsc.mm10
r-lattice
r-mass
r-org.hs.eg.db
r-org.mm.eg.db
r-runit
r-tensorflow
r-testthat
r-txdb.hsapiens.ucsc.hg19.knowngene
r-txdb.mmusculus.ucsc.mm10.knowngene
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('7b8d8646f35dc00d7c8f18d84b8f030c4a9a116fd352590a6af7294135968c36')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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