blob: 9e40afd501eb1ba3e3b3a37f024a2ac60c66d54e (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=CytoTree
_pkgver=1.6.0
pkgname=r-${_pkgname,,}
pkgver=1.6.0
pkgrel=4
pkgdesc='A Toolkit for Flow And Mass Cytometry Data'
arch=('x86_64')
url="https://bioconductor.org/packages/3.15/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-biocneighbors
r-destiny
r-flowcore
r-flowsom
r-flowutils
r-ggplot2
r-gmodels
r-igraph
r-limma
r-matrixstats
r-mclust
r-pheatmap
r-prettydoc
r-rann
r-rcpp
r-rtsne
r-scatterpie
r-scatterplot3d
r-stringr
r-sva
r-umap
)
optdepends=(
r-biocgenerics
r-biocstyle
r-knitr
r-rcolorbrewer
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/3.15/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('a8cd66a10de1468d24e620c25d523e643a8508f8db68070ab7cf8e3625874db7')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|