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# Maintainer: guoyi <kuoi@malacology.net>
_pkgname=dartR.base
_pkgver=1.0.5
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//[:-]/.}
pkgrel=1
pkgdesc="Analysing 'SNP' and 'Silicodart' Data - Basic Functions"
arch=('any')
url="https://cran.r-project.org/package=${_pkgname}"
license=('GPL-3.0-or-later')
depends=(
r-adegenet
r-ape
r-crayon
r-dartr.data
r-data.table
r-dplyr
r-foreach
r-ggplot2
r-gridextra
r-patchwork
r-plyr
r-raster
r-reshape2
r-snpassoc
r-snprelate
r-snpstats
r-stampp
r-stringr
r-tidyr
)
optdepends=(
r-devtools
r-directlabels
r-dismo
r-doparallel
r-expm
r-fields
r-gdistance
r-gganimate
r-ggrepel
r-ggtern
r-ggthemes
r-gplots
r-gtable
r-hardyweinberg
r-hierfstat
r-igraph
r-iterpc
r-knitr
r-label.switching
r-leaflet
r-leaflet.minicharts
r-markdown
r-mmod
r-networkd3
r-pegas
r-pheatmap
r-plotly
r-poppr
r-proxy
r-purrr
r-qvalue
r-rcolorbrewer
r-rcpp
r-rgl
r-rmarkdown
r-rrblup
r-scales
r-seqinr
r-sf
r-shinybs
r-shinyjs
r-shinythemes
r-shinywidgets
r-siber
r-stringi
r-terra
r-testthat
r-tibble
r-vcfr
r-viridis
r-zoo
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('5bf9a9a98080c55e1de812c2bce9a082')
b2sums=('9295823ce7473fb96331f3d89c2b03cf1b4077c1af478f615be6cbf6088a748b3b5592d8194a2dd4fa9f5bba1bba7593619c006318454fea111dc8cef13d0b15')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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