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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=dce
_pkgver=1.10.0
pkgname=r-${_pkgname,,}
pkgver=1.10.0
pkgrel=1
pkgdesc='Pathway Enrichment Based on Differential Causal Effects'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-assertthat
r-dplyr
r-edger
r-epinem
r-expm
r-ggplot2
r-ggraph
r-glm2
r-glue
r-graph
r-graphite
r-harmonicmeanp
r-igraph
r-logger
r-magrittr
r-metap
r-mnem
r-naturalsort
r-org.hs.eg.db
r-pcalg
r-ppcor
r-purrr
r-reshape2
r-rgraphviz
r-rlang
r-shadowtext
r-tidygraph
r-tidyverse
)
optdepends=(
r-biocstyle
r-carnival
r-cowplot
r-curatedtcgadata
r-dagitty
r-devtools
r-docopt
r-formatr
r-ggplotify
r-knitr
r-lmtest
r-rcppparallel
r-rmarkdown
r-sandwich
r-summarizedexperiment
r-tcgautils
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('2ce61401088157306407c4c7e8c4c4bb07b7eccc9e884cf30f30b04b8409d077')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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