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# system requirements: C++11, jupyter nbconvert (see nbconvertR’s INSTALLfile)
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=destiny
_pkgver=3.20.0
pkgname=r-${_pkgname,,}
pkgver=3.20.0
pkgrel=1
pkgdesc='Creates diffusion maps'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-biocgenerics
r-ggplot.multistats
r-ggplot2
r-ggthemes
r-irlba
r-knn.covertree
r-pcamethods
r-proxy
r-rcpp
r-rcppeigen
r-rcpphnsw
r-rspectra
r-scales
r-scatterplot3d
r-singlecellexperiment
r-smoother
r-summarizedexperiment
r-tidyr
r-tidyselect
r-vim
gcc
jupyter-nbconvert
)
optdepends=(
r-conflicted
r-cowplot
r-fnn
r-gridextra
r-igraph
r-knitr
r-org.mm.eg.db
r-repr
r-rgl
r-rgl
r-rmarkdown
r-scran
r-scrnaseq
r-singlecellexperiment
r-testthat
r-tidyverse
r-viridis
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('43ed9cce5e01419697ea965ee3257a473eca071716aa8b824c09655791dd5b95')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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