blob: bff31e32156738b69867a3376ca2a30bb8d6e910 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
|
# system requirements: C++11, jupyter nbconvert (see nbconvertR’s INSTALLfile)
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=destiny
_pkgver=3.16.0
pkgname=r-${_pkgname,,}
pkgver=3.16.0
pkgrel=1
pkgdesc='Creates diffusion maps'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-biocgenerics
r-ggplot.multistats
r-ggplot2
r-ggthemes
r-irlba
r-knn.covertree
r-pcamethods
r-proxy
r-rcpp
r-rcppeigen
r-rcpphnsw
r-rspectra
r-scales
r-scatterplot3d
r-singlecellexperiment
r-smoother
r-summarizedexperiment
r-tidyr
r-tidyselect
r-vim
gcc
jupyter-nbconvert
)
optdepends=(
r-conflicted
r-cowplot
r-fnn
r-gridextra
r-igraph
r-knitr
r-org.mm.eg.db
r-repr
r-rgl
r-rgl
r-rmarkdown
r-scran
r-scrnaseq
r-singlecellexperiment
r-testthat
r-tidyverse
r-viridis
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('c6f69489d4d667f96fc1b2b4abfc3c69ccc5a5f68563d06aa72869a529f6bc1b')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|