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# system requirements: To generate html reports pandoc(http://pandoc.org/installing.html) is required.
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=DiscoRhythm
_pkgver=1.18.0
pkgname=r-${_pkgname,,}
pkgver=1.18.0
pkgrel=1
pkgdesc='Interactive Workflow for Discovering Rhythmicity in Biological Data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocgenerics
r-biocstyle
r-broom
r-data.table
r-dplyr
r-dt
r-ggextra
r-ggplot2
r-gridextra
r-heatmaply
r-kableextra
r-knitr
r-magick
r-matrixstats
r-matrixtests
r-metacycle
r-plotly
r-reshape2
r-rmarkdown
r-s4vectors
r-shiny
r-shinybs
r-shinycssloaders
r-shinydashboard
r-shinyjs
r-summarizedexperiment
r-upsetr
r-venndiagram
r-viridis
r-zip
pandoc
)
optdepends=(
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('cfeb8e7ac7b143894c4151f68b4fbe7576ffeb10ab1ec72318150704365c626f')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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