blob: d2eb929ac814390ea0fd9996ae6e518c21d38792 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=easier
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=1.12.0
pkgrel=1
pkgdesc='Estimate Systems Immune Response from RNA-seq data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-biocparallel
r-coin
r-decoupler
r-deseq2
r-dorothea
r-dplyr
r-easierdata
r-ggplot2
r-ggpubr
r-ggrepel
r-magrittr
r-matrixstats
r-progeny
r-quantiseqr
r-reshape2
r-rlang
r-rocr
r-rstatix
r-tibble
r-tidyr
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
r-summarizedexperiment
r-testthat
r-viper
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('a202697c988d90e4e7d36700c393df67695f0620e087671d8f35b5123b1941dc')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
|