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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=epivizrData
_pkgver=1.32.0
pkgname=r-${_pkgname,,}
pkgver=1.32.0
pkgrel=1
pkgdesc='Data Management API for epiviz interactive visualization app'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-biobase
r-ensembldb
r-epivizrserver
r-genomeinfodb
r-genomicfeatures
r-genomicranges
r-iranges
r-organismdbi
r-s4vectors
r-summarizedexperiment
)
optdepends=(
r-annotationhub
r-biocstyle
r-bumphunter
r-dbi
r-ensdb.mmusculus.v79
r-hgu133plus2.db
r-knitr
r-matrixstats
r-mus.musculus
r-rjson
r-rmarkdown
r-rmysql
r-roxygen2
r-rtracklayer
r-testthat
r-txdb.mmusculus.ucsc.mm10.knowngene
r-utils
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('381bea00a99d79810713acbd755bdd9b1054ac05241ca8f24a20d89d013fa487')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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