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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=FastqCleaner
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=1.20.0
pkgrel=1
pkgdesc='A Shiny Application for Quality Control, Filtering and Trimming of FASTQ Files'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-biostrings
r-dt
r-htmltools
r-iranges
r-rcpp
r-s4vectors
r-shiny
r-shinybs
r-shortread
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('84fe332d6b8a0687a2df0845d8e804ba0bf364b60b878e48e33fa472c016c76c')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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