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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=FindIT2
_pkgver=1.10.0
pkgname=r-${_pkgname,,}
pkgver=1.10.0
pkgrel=1
pkgdesc='find influential TF and Target based on multi-omics data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biocgenerics
r-biocparallel
r-dplyr
r-genomeinfodb
r-genomicfeatures
r-genomicranges
r-ggplot2
r-ggrepel
r-glmnet
r-iranges
r-multiassayexperiment
r-patchwork
r-progress
r-purrr
r-qvalue
r-rlang
r-rtracklayer
r-s4vectors
r-stringr
r-summarizedexperiment
r-tibble
r-tidyr
r-withr
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
r-sessioninfo
r-testthat
r-txdb.athaliana.biomart.plantsmart28
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('c259f2a45cbc37d81ffe9ac2bbc87346ef302d316f305debdf969e6069af6e0d')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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