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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=FindMyFriends
_pkgver=1.24.0
pkgname=r-${_pkgname,,}
pkgver=1.24.0
pkgrel=5
pkgdesc='Microbial Comparative Genomics in R'
arch=('x86_64')
url="https://bioconductor.org/packages/3.14/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-biocgenerics
r-biocparallel
r-biostrings
r-digest
r-dplyr
r-filehash
r-ggdendro
r-ggplot2
r-gtable
r-igraph
r-iranges
r-kebabs
r-rcpp
r-reshape2
r-s4vectors
)
makedepends=(
git
)
optdepends=(
r-biocstyle
r-knitr
r-reutils
r-rmarkdown
r-testthat
)
source=("git+https://git.bioconductor.org/packages/${_pkgname}.git")
sha256sums=('SKIP')
prepare(){
# No such file, its only in description.
sed -i "/'zzz.R'/d" ${_pkgname}/DESCRIPTION
}
build() {
tar -zcvf ${_pkgname}.tar.gz ${_pkgname}
R CMD INSTALL ${_pkgname}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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