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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=gemini
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=1.20.0
pkgrel=1
pkgdesc='GEMINI: Variational inference approach to infer genetic interactions from pairwise CRISPR screens'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('BSD')
depends=(
r
r-dplyr
r-ggplot2
r-magrittr
r-mixtools
r-pbmcapply
r-scales
)
optdepends=(
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('1492c306937943f0e22c3c6e22f2f35cab0604ccb9560195a1f0c7d8b67253e4')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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