PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=GeneExpressionSignature
_pkgver=1.56.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Gene Expression Signature based Similarity Metric"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-only')
depends=(
  r-biobase
)
optdepends=(
  r-apcluster
  r-biocstyle
  r-geoquery
  r-knitr
  r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('06fc71ca3845a17dd8a94afe9016a787')
b2sums=('795faa6938202a279b790bfed1953b66a25d266aa78ddd4cfe7dbe9f232dbab3bc8c6864b2c23d30fd47c76b7b1be853449ea424c0a2e70f605a16ff6ad0a42d')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}