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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=GENESIS
_pkgver=2.32.0
pkgname=r-${_pkgname,,}
pkgver=2.32.0
pkgrel=1
pkgdesc='GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-biocgenerics
r-biocparallel
r-data.table
r-gdsfmt
r-genomicranges
r-gwastools
r-igraph
r-iranges
r-reshape2
r-s4vectors
r-seqarray
r-seqvartools
r-snprelate
)
optdepends=(
r-biocstyle
r-compoissonreg
r-compquadform
r-dplyr
r-ggally
r-ggplot2
r-gwasdata
r-knitr
r-poibin
r-rcolorbrewer
r-rmarkdown
r-spatest
r-survey
r-testthat
r-txdb.hsapiens.ucsc.hg19.knowngene
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('891680387ea63682d977b08d2d5706892efea4c26cee855104489f2354a09db1')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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