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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=GenomicSuperSignature
_pkgver=1.10.0
pkgname=r-${_pkgname,,}
pkgver=1.10.0
pkgrel=1
pkgdesc='Interpretation of RNA-seq experiments through robust, efficient comparison to public databases'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biobase
r-biocfilecache
r-complexheatmap
r-dplyr
r-flextable
r-ggplot2
r-ggpubr
r-plotly
r-s4vectors
r-summarizedexperiment
r-irlba
)
optdepends=(
r-bcellviper
r-biocmanager
r-biocstyle
r-circlize
r-cluster
r-clusterprofiler
r-devtools
r-enrichmentbrowser
r-forcats
r-knitr
r-msigdbr
r-pkgdown
r-rcolorbrewer
r-readr
r-reshape2
r-rmarkdown
r-roxygen2
r-stats
r-testthat
r-tibble
r-usethis
r-utils
r-wordcloud
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('c0deb6a2ceb4e8e4a725716b1803969d35ef5fc15b47943eb91c34ac5248062b')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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