blob: 4ee436f59bc4ebcf550db58851ff2b99d490ac2e (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=GEOfastq
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=1.16.0
pkgrel=1
pkgdesc='Downloads ENA Fastqs With GEO Accessions'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-doparallel
r-foreach
r-plyr
r-rcurl
r-rvest
r-stringr
r-xml2
)
optdepends=(
r-bioccheck
r-knitr
r-rmarkdown
r-roxygen2
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('b9d10167f92eb7f0b7b8bc21a0df1b3c1953ac3868c54b50757add5f7ff872f8')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
|