PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=GNET2
_pkgver=1.22.0
pkgname=r-${_pkgname,,}
pkgver=1.22.0
pkgrel=1
pkgdesc='Constructing gene regulatory networks from expression data through functional module inference'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Apache')
depends=(
  r
  r-diagrammer
  r-dplyr
  r-ggplot2
  r-igraph
  r-matrixstats
  r-rcpp
  r-reshape2
  r-summarizedexperiment
  r-xgboost
)
optdepends=(
  r-knitr
  r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('c37e85ce4b1c25a11f83596e1198dc49f0c61a5501cd560b42f5ee64a8672d4d')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: