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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=GSALightning
_pkgver=1.32.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Fast Permutation-based Gene Set Analysis"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-or-later')
depends=(
  r-data.table
)
optdepends=(
  r-knitr
  r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('f8d3ede999d557bc75d7291617b51471')
b2sums=('02e8088311883f4c061b8ca806cbba74e295a4bf859ad4ade5f1e15a37d41d7f4833f9c0f51b0a1afa5005d12b92416cc517c25749924039673a1338017af45b')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}