PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=GSEABenchmarkeR
_pkgver=1.24.0
pkgname=r-${_pkgname,,}
pkgver=1.24.0
pkgrel=1
pkgdesc='Reproducible GSEA Benchmarking'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
  r
  r-annotationdbi
  r-annotationhub
  r-biobase
  r-biocfilecache
  r-biocparallel
  r-edger
  r-enrichmentbrowser
  r-experimenthub
  r-keggandmetacoredzpathwaysgeo
  r-keggdzpathwaysgeo
  r-s4vectors
  r-summarizedexperiment
)
optdepends=(
  r-biocstyle
  r-gse62944
  r-knitr
  r-rappdirs
  r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('f1bb7984499eeec7271533fe00900ec689384fb0efc42c60c23c0cb6aefb4c85')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: