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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=hdf5r
_pkgver=1.3.10
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=4
pkgdesc="Interface to the 'HDF5' Binary Data Format"
arch=(x86_64)
url="https://cran.r-project.org/package=$_pkgname"
license=('Apache-2.0')
depends=(
hdf5
r-bit64
r-r6
)
checkdepends=(
r-testthat
)
optdepends=(
r-formatr
r-knitr
r-nycflights13
r-reshape2
r-rmarkdown
r-testthat
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz"
"$_pkgname-fix-cast.patch::https://github.com/hhoeflin/hdf5r/pull/222.patch")
md5sums=('6bd2d45695b64a082a88324a901b571c'
'768237304963abc03caf47b078e724ae')
b2sums=('f299fcd4d148f4082c8eefec8f9f47bc3e97127ddfaefa3af22aea54f48d374431e8cf1f428b6a5d2d4c8cb68375a50feadb9a0c82766235382cac9bb9a55478'
'e4052485092f1a479047b89dcf690101596ac86bf8c327afa9c3ab6ebb69594d22dffe3715e0714bf32fad4e3c2c6b464865c02f1c1fd0f1a803686d66477b90')
prepare() {
# fix build
patch -Np1 -d "$_pkgname" < "$_pkgname-fix-cast.patch"
}
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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