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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=HiCcompare
_pkgver=1.28.0
pkgname=r-${_pkgname,,}
pkgver=1.28.0
pkgrel=1
pkgdesc='HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-biocparallel
r-data.table
r-dplyr
r-genomicranges
r-ggplot2
r-gridextra
r-gtools
r-interactionset
r-iranges
r-pheatmap
r-rhdf5
r-s4vectors
)
optdepends=(
r-knitr
r-multihiccompare
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('cee900943715a65d4e4a56dae0b29da661efed7750e7d34971ef5a45357485f3')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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