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# system requirements: Python (>= 3.5.0), hic-straw
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=idr2d
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=1.20.0
pkgrel=1
pkgdesc='Irreproducible Discovery Rate for Genomic Interactions Data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-dplyr
r-futile.logger
r-genomeinfodb
r-genomicranges
r-ggplot2
r-idr
r-iranges
r-magrittr
r-reticulate
r-scales
r-stringr
python
)
optdepends=(
r-dt
r-htmltools
r-knitr
r-rmarkdown
r-roxygen2
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('1a3192180eff9ddc701789a771e8790f64391150d048276d26f2ed0bfa32e87b')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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