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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=imcRtools
_pkgver=1.14.0
pkgname=r-${_pkgname,,}
pkgver=1.14.0
pkgrel=1
pkgdesc='Methods for imaging mass cytometry data analysis'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-abind
r-biocneighbors
r-biocparallel
r-concaveman
r-cytomapper
r-data.table
r-distances
r-dplyr
r-dt
r-ebimage
r-ggplot2
r-ggraph
r-igraph
r-magrittr
r-matrixgenerics
r-pheatmap
r-readr
r-rtriangle
r-s4vectors
r-scuttle
r-sf
r-singlecellexperiment
r-spatialexperiment
r-stringr
r-summarizedexperiment
r-tidygraph
r-tidyselect
r-viridis
r-vroom
)
optdepends=(
r-biocstyle
r-catalyst
r-grid
r-knitr
r-markdown
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('b352381c6bf085344843c46b2b0e3c1e8e4c461598e0300f6df3bb116fbb2884')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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