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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=IONiseR
_pkgver=2.26.0
pkgname=r-${_pkgname,,}
pkgver=2.26.0
pkgrel=1
pkgdesc='Quality Assessment Tools for Oxford Nanopore MinION data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-biocgenerics
r-biocparallel
r-biostrings
r-bit64
r-dplyr
r-ggplot2
r-magrittr
r-rhdf5
r-shortread
r-stringr
r-tibble
r-tidyr
r-xvector
)
optdepends=(
r-biocstyle
r-gridextra
r-knitr
r-minionsummarydata
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('3fbf3b807cbe71b635f1e917f370cc398bf6ec704b7372ae56fa4e40302ca9f8')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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