blob: f52137ca75a07a3002a11aaa6249e961f248053e (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
_pkgname=kebabs
_pkgver=1.38.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Kernel-Based Analysis of Biological Sequences"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-or-later')
depends=(
r-apcluster
r-biostrings
r-e1071
r-kernlab
r-liblinear
r-rcpp
r-s4vectors
r-xvector
)
makedepends=(
r-iranges
)
optdepends=(
r-biobase
r-biocgenerics
r-knitr
r-sparsem
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('57055e5f84f557bfa2c36408edb2d31c')
b2sums=('d6db681ab71ea6a2725c58214997b92b818917a5696be8635dad79877b8bd512c87e82d7fd35f9623e0797b8116eb752d8b676421a51824fa36d5a834e9fb5c4')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
|