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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=limma
_pkgver=3.64.1
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Linear Models for Microarray and Omics Data"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-or-later')
depends=(
r-statmod
)
optdepends=(
r-affy
r-annotationdbi
r-biasedurn
r-biobase
r-biocstyle
r-ellipse
r-go.db
r-gplots
r-illuminaio
r-knitr
r-locfit
r-org.hs.eg.db
r-vsn
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('265dfd0ff7a6597ab3aed54af7b36022')
b2sums=('8565cada205b8785881dec370df7f4b30d90327247c7c76cfdc426261b170bea2af608245eef4d5e0a21c787c024034b77ca2fcdbc6834ac42f0b8e0d7405029')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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