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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=limma
_pkgver=3.68.5
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Linear Models for Microarray and Omics Data"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-or-later')
depends=(
r-statmod
)
optdepends=(
r-affy
r-annotationdbi
r-biasedurn
r-biobase
r-biocstyle
r-ellipse
r-go.db
r-gplots
r-illuminaio
r-knitr
r-locfit
r-org.hs.eg.db
r-vsn
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('473b53b1c0b7abec13ffa570f36af2f6')
b2sums=('168ba2ab248aed21de526b918134d8bcae22d829e5ff3b4b31810eda5e509bec40c6ef18b8860baf2ec5ac84b66008d59950f4878fa8f4b0379ed76b4d0267ab')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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