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# system requirements: C++11
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=mbkmeans
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=1.20.0
pkgrel=1
pkgdesc='Mini-batch K-means Clustering for Single-Cell RNA-seq'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-beachmat
r-benchmarkme
r-biocparallel
r-clusterr
r-delayedarray
r-rcpp
r-rcpparmadillo
r-rhdf5lib
r-s4vectors
r-singlecellexperiment
r-summarizedexperiment
gcc
)
optdepends=(
r-beachmat
r-biocstyle
r-bluster
r-delayedmatrixstats
r-hdf5array
r-knitr
r-rhdf5lib
r-rmarkdown
r-scater
r-tenxpbmcdata
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('da05dd9ee537efe35d37c755e412fc8e0e260366945fbe18859039b6aa37ce3a')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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