summarylogtreecommitdiffstats
path: root/PKGBUILD
blob: 2ef8a8d59d8e0499a2d33b6bf3a81367b8275039 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=MEB
_pkgver=1.26.0
pkgname=r-${_pkgname,,}
pkgver=1.26.0
pkgrel=1
pkgdesc='A normalization-invariant minimum enclosing ball method to detect differentially expressed genes for RNA-seq data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
  r
  r-e1071
  r-edger
  r-scater
  r-singlecellexperiment
  r-summarizedexperiment
  r-wrswor
)
optdepends=(
  r-biocstyle
  r-knitr
  r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('9c2ecf485a2f62b12870f7049a744f5b166eaa8c7118c2738b9fd8963731fd96')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: