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# system requirements: megadepth(<https://github.com/ChristopherWilks/megadepth>)
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=megadepth
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=1.16.0
pkgrel=1
pkgdesc='megadepth: BigWig and BAM related utilities'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-cmdfun
r-dplyr
r-fs
r-genomicranges
r-magrittr
r-readr
r-xfun
)
optdepends=(
r-biocstyle
r-covr
r-derfinder
r-genomeinfodb
r-knitr
r-refmanager
r-rmarkdown
r-rtracklayer
r-sessioninfo
r-testthat
r-tools
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('36851f16333695c0a143ab7c5182f5933cf993e9cc92cb66bcd430763c185eb1')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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