PKGBUILD


1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35

# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=MetaboCoreUtils
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Core Utils for Metabolomics Data"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
  r-biocparallel
  r-mscoreutils
)
optdepends=(
  r-biocstyle
  r-knitr
  r-rmarkdown
  r-robustbase
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('2e81d4df496bdd70d83722bc467b762e')
b2sums=('52c9c5cb0d7b987f8dd98aabbc261155c26ac629bb1c7945537140fcec20237787a3884bfad05fcad4d93cc6751310da9ea1d8b10aab418b3880a9119ecedaa9')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}