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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=metagene
_pkgver=2.31.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=2
pkgdesc="A package to produce metagene plots"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-biocparallel
r-data.table
r-ensdb.hsapiens.v86
r-ensembldb
r-genomeinfodb
r-genomicalignments
r-genomicfeatures
r-genomicranges
r-ggplot2
r-gplots
r-iranges
r-magrittr
r-matrixstats
r-purrr
r-r6
r-rsamtools
r-rtracklayer
r-stringr
)
optdepends=(
r-biocgenerics
r-biocstyle
r-knitr
r-rmarkdown
r-runit
r-similarpeak
)
source=("https://bioconductor.org/packages/3.17/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('4709f553e306643ec3d37860f4092ddc')
b2sums=('eea5068082af2b3e785b155c257df1638c3599ddfea17fbb09b59aa995dfbddfa7c801a9f14fad5732d8d927a50ce4747217249c7b939c081c6ada4959f5e2d2')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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