PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=MethPed
_pkgver=1.38.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-only')
depends=(
  r-biobase
  r-randomforest
)
optdepends=(
  r-biocstyle
  r-impute
  r-knitr
  r-markdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('796041888e5a789b2135ce93fef21fce')
b2sums=('27c74575df92886853ad6ab116fd89573385d373def81c6e6740ad411e76f2f22f1aad33bd2c7284fbd038c1606eb1eaf046ed6f4c46806dc19bf38829bc641e')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}