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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=methylscaper
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Visualization of Methylation Data"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-only')
depends=(
r-biocparallel
r-biostrings
r-data.table
r-pwalign
r-rfast
r-seqinr
r-seriation
r-shiny
r-shinyfiles
r-shinyjs
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-devtools
r-knitr
r-r.utils
r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('10c38457c1084a592f17a119416019d6')
b2sums=('ea3fc205c9418a888de0ad3729aaae9e0d3f52e67096485f484fe0cba4483ebcbd014828b0d760a0fcd622ca0df70edcf35b5868fe3052ac56f087370eadeacf')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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