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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=miRspongeR
_pkgver=2.10.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Identification and analysis of miRNA sponge regulation"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-clusterprofiler
r-corpcor
r-doparallel
r-dose
r-foreach
r-igraph
r-linkcomm
r-mcl
r-org.hs.eg.db
r-rcpp
r-reactomepa
r-sponge
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('cf7c860e44629876bb7c4d6cacc6635f')
b2sums=('26b79806af266db41536c8bba65c0e8b07cc01220732172ad5cc41074db7d765dcc54a76c6c8112f223f5a09aaaf7225f51b9fb0e343c37fbf7edace75c39ba9')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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