blob: 487dc2ac0048f79439728077b8e429700e890ec2 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=MMUPHin
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=1.16.0
pkgrel=1
pkgdesc='Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-cowplot
r-dplyr
r-fpc
r-ggplot2
r-igraph
r-maaslin2
r-metafor
r-stringr
r-tidyr
)
optdepends=(
r-biocstyle
r-curatedmetagenomicdata
r-genefilter
r-knitr
r-magrittr
r-phyloseq
r-rmarkdown
r-testthat
r-vegan
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('cd54f608cb11e8995ac6f34aba7fb6e3c0e118da1a1804472b106fe94bd71b52')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
|