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# system requirements: Python (>=3), numpy, pandas, h5py, scipy, argparse,sklearn, mofapy2
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=MOFA2
_pkgver=1.14.0
pkgname=r-${_pkgname,,}
pkgver=1.14.0
pkgrel=1
pkgdesc='Multi-Omics Factor Analysis v2'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-basilisk
r-corrplot
r-cowplot
r-delayedarray
r-dplyr
r-forcats
r-ggplot2
r-ggrepel
r-hdf5array
r-magrittr
r-pheatmap
r-rcolorbrewer
r-reshape2
r-reticulate
r-rhdf5
r-rtsne
r-stringi
r-tidyr
r-uwot
)
optdepends=(
r-biocstyle
r-data.table
r-foreach
r-ggally
r-ggpubr
r-ggrastr
r-knitr
r-markdown
r-matrix
r-multiassayexperiment
r-mvtnorm
r-psych
r-rmarkdown
r-seurat
r-singlecellexperiment
r-summarizedexperiment
r-testthat
r-tidyverse
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('18975d2072c35160cc4f5218977e2c94ab82389478b65c5c6f3412c257dcc069')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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