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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=MOSim
_pkgver=2.0.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Multi-Omics Simulation (MOSim)"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-dplyr
r-edger
r-ggplot2
r-hiddenmarkov
r-iranges
r-lazyeval
r-matrixstats
r-rcpp
r-rlang
r-s4vectors
r-scran
r-seurat
r-signac
r-stringi
r-stringr
r-zoo
)
makedepends=(
r-cpp11
)
optdepends=(
r-biobase
r-biocstyle
r-bluster
r-decor
r-igraph
r-knitr
r-leiden
r-markdown
r-purrr
r-rmarkdown
r-rsamtools
r-scales
r-scater
r-singlecellexperiment
r-testthat
r-tibble
r-tidyr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('f6de9c73396f84ca3dea595207c5186f')
b2sums=('fe7fffaf7c8c2ae6e4e233bf530442f9c3f02716d446738e56e8de1e2962ea3b6332ec2764638ef2e00bf1cb939b8a81b40913232ddc7d4e4d6f27d51343a983')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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