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# system requirements: C++11
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=motifmatchr
_pkgver=1.24.0
pkgname=r-${_pkgname,,}
pkgver=1.24.0
pkgrel=1
pkgdesc='Fast Motif Matching in R'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biostrings
r-bsgenome
r-genomeinfodb
r-genomicranges
r-iranges
r-rcpp
r-rcpparmadillo
r-rsamtools
r-s4vectors
r-summarizedexperiment
r-tfbstools
gcc
)
optdepends=(
r-bsgenome.hsapiens.ucsc.hg19
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('d2848ba2227bfe914e57157fbbb22c44a13848bb26b9f295bef86d7f7b7a738e')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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