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# system requirements: GNU make
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=msa
_pkgver=1.38.0
pkgname=r-${_pkgname,,}
pkgver=1.38.0
pkgrel=1
pkgdesc='Multiple Sequence Alignment'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocgenerics
r-biostrings
r-iranges
r-rcpp
r-s4vectors
make
)
optdepends=(
r-ape
r-biobase
r-knitr
r-phangorn
r-seqinr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('8fca7be5a9c8eeca4d8e9313e245a6763edf0eeef76f255803f1a740a1bbc56c')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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