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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=multiGSEA
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=1.16.0
pkgrel=1
pkgdesc='Combining GSEA-based pathway enrichment with multi omics data integration'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-annotationdbi
r-dplyr
r-fgsea
r-graphite
r-magrittr
r-metaboliteidmapping
r-metap
r-rappdirs
r-rlang
)
optdepends=(
r-biocstyle
r-knitr
r-org.bt.eg.db
r-org.ce.eg.db
r-org.cf.eg.db
r-org.dm.eg.db
r-org.dr.eg.db
r-org.gg.eg.db
r-org.hs.eg.db
r-org.mm.eg.db
r-org.rn.eg.db
r-org.ss.eg.db
r-org.xl.eg.db
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('0cb5687f02b96dc5418bf3944c4258ad7ff1b40a6d43783d7ffd657eb67cbd37')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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