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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=NanoTube
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=1.16.0
pkgrel=1
pkgdesc='An Easy Pipeline for NanoString nCounter Data Analysis'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-fgsea
r-ggplot2
r-limma
r-reshape
)
optdepends=(
r-grid
r-kableextra
r-knitr
r-nanostringdiff
r-pheatmap
r-plotly
r-rlang
r-rmarkdown
r-ruv
r-ruvseq
r-shiny
r-testthat
r-xlsx
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('035c0075727b265667a09911b2be02eaa68b116775e7747296c1c602c4ea9a6c')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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