blob: 1bd77222d04818015cf7ebcf1b3c22fdae8dc587 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=NetSAM
_pkgver=1.42.0
pkgname=r-${_pkgname,,}
pkgver=1.42.0
pkgrel=1
pkgdesc='Network Seriation And Modularization'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('LGPL')
depends=(
r
r-annotationdbi
r-biomart
r-dbi
r-doparallel
r-foreach
r-go.db
r-igraph
r-r2html
r-seriation
r-wgcna
)
optdepends=(
r-biocgenerics
r-knitr
r-markdown
r-org.at.tair.db
r-org.ce.eg.db
r-org.cf.eg.db
r-org.dm.eg.db
r-org.dr.eg.db
r-org.hs.eg.db
r-org.mm.eg.db
r-org.rn.eg.db
r-org.sc.sgd.db
r-rmarkdown
r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('8a22967f7a745e5accc3ca92a6ff7e3e1caa45d6141e82ee2ab78180ef1933f9')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|