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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=noisyr
_pkgver=1.0.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Noise Quantification in High Throughput Sequencing Output"
arch=(any)
url="https://cran.r-project.org/package=$_pkgname"
license=('GPL-2.0-only')
depends=(
r-doparallel
r-dplyr
r-foreach
r-genomicranges
r-ggplot2
r-iranges
r-magrittr
r-philentropy
r-preprocesscore
r-rsamtools
r-tibble
)
optdepends=(
r-knitr
r-rmarkdown
r-roxygen2
r-testthat
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('970c060f9754927acdbb2af41ac01dea')
b2sums=('31b1f41944205c6b2e64734196d804d221ac1dbdee0a7a38f362562e30a2000a24db7b0efb9adfe6c61a11f365569e70f9a1af77decddac53b808c9149370c48')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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