blob: 89ae6134f7b6859186a2f96b0a0d57610999b771 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=oncomix
_pkgver=1.26.0
pkgname=r-${_pkgname,,}
pkgver=1.26.0
pkgrel=1
pkgdesc='Identifying Genes Overexpressed in Subsets of Tumors from Tumor-Normal mRNA Expression Data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-ggplot2
r-ggrepel
r-mclust
r-rcolorbrewer
r-summarizedexperiment
)
optdepends=(
r-knitr
r-rmarkdown
r-rmysql
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('c05fe4a150202f081572bb777c3091143540ef298afbe833b4ad0fe92f485705')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|