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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
# Contributor: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=oposSOM
_pkgver=2.24.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Comprehensive analysis of transcriptome data"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-or-later')
depends=(
onetbb
r-ape
r-biobase
r-biomart
r-fastica
r-fdrtool
r-graph
r-igraph
r-pixmap
r-png
r-rcpp
r-rcppparallel
r-rcurl
r-scatterplot3d
r-tsne
r-xml
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('205b90618691057e82de1a844fb89ce9')
b2sums=('e88d8ea0914925c4b6ca2146129c681946a7f416ac6b9bf58815dcd53830e1ca51b08d666c3efd368758f42af2f8d713dca08e9096c7c24387af4c4043fec459')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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