blob: 84ce942deb7f65c297678248304e096df25636a7 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
|
# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=orthosData
_pkgver=1.2.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Data for the orthos package"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
r-annotationhub
r-biocfilecache
r-experimenthub
r-hdf5array
r-stringr
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-ggplot2
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('364f2cb98aa8e31cf1d4bf142b88680f')
b2sums=('318b134f053256cc1ae6fccb0c76d7b4a664fecbdb89dac3ec02586b5ae6e01efc76fd076e96f47d0d5f5daaeaea58582bb2eb27f2ccada646c7016734543db3')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
|