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# system requirements: C++11
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=PCAtools
_pkgver=2.14.0
pkgname=r-${_pkgname,,}
pkgver=2.14.0
pkgrel=1
pkgdesc='PCAtools: Everything Principal Components Analysis'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-beachmat
r-bh
r-biocparallel
r-biocsingular
r-cowplot
r-delayedarray
r-delayedmatrixstats
r-dqrng
r-ggplot2
r-ggrepel
r-rcpp
r-reshape2
gcc
)
optdepends=(
r-airway
r-beachmat
r-biobase
r-biocgenerics
r-deseq2
r-geoquery
r-ggalt
r-ggplotify
r-hgu133a.db
r-knitr
r-magrittr
r-org.hs.eg.db
r-rmarkdown
r-rmtstat
r-scran
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('3a0cd8599344ad44787db090b559351e8a17afbef9dff4f717b5ca4627d93fa3')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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